refactor: consolidate hypotheses, agent_signals, and process_logs into action-based smart tools

agent-rules/mcp_memory_workflow.md

@@ -24,6 +24,9 @@ The MCP Memory server is the central brain. You must be PROACTIVE, not reactive,
 - **Task Management**: When creating tasks, supply `priority` ('low'|'medium'|'high'|'urgent'), `assigned_agent` (e.g. subagent role), `verification_command` (automated test command), and `acceptance_criteria`.
 - **VCS & SVN Agnosticism**: Supply `vcs_type` ('git'|'svn'|'hg'), `vcs_revision` (git hash or svn revision like 'r12345'), and `upstream_url` to `log_code_change` and workspace tools.
 - **Terminal & Shell Context**: Terminal sessions and commands are automatically tracked in the server. Query `/terminal/history` or recent logs when analyzing shell execution context.
+- **Hypotheses & Root Cause Analysis**: When diagnosing complex bugs or race conditions, call `hypotheses` (action: "log" / "query") to record test evidence and maintain reasoning trails across sessions.
+- **Inter-Agent Coordination**: Autonomous subagents should call `agent_signals` (action: "broadcast" / "query") to publish events and discover peer agent status.
+- **Process & Daemon Logs**: Query or tail daemon logs with `process_logs` (action: "get", "watch", "clear") instead of dumping log files into context.
 
 ## 3. Delegation
 Continue to use the `MemoryLibrarian` subagent to log routine code changes (`log_code_change`) in the background to prevent cluttering the main conversation context.